CDS

Accession Number TCMCG057C38333
gbkey CDS
Protein Id XP_018445510.1
Location join(797389..797539,797874..798043,798196..798395,798493..798591,798945..798987,799152..799211,799315..799395,799727..799843,800150..800233,800520..800641,800813..800932,801024..801153,801237..801347,801495..801623,801801..801904,801988..802132,802219..802366,802460..802560,802631..802708,802779..802934,803002..803076,803170..803289)
Gene LOC108817346
GeneID 108817346
Organism Raphanus sativus

Protein

Length 847aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018590008.1
Definition PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category G
Description enzyme 2.2
KEGG_TC -
KEGG_Module M00565        [VIEW IN KEGG]
KEGG_Reaction R02110        [VIEW IN KEGG]
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K00700        [VIEW IN KEGG]
EC 2.4.1.18        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00500        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00500        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0001678        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003844        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009501        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009744        [VIEW IN EMBL-EBI]
GO:0009746        [VIEW IN EMBL-EBI]
GO:0009749        [VIEW IN EMBL-EBI]
GO:0009750        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010021        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016757        [VIEW IN EMBL-EBI]
GO:0016758        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0033500        [VIEW IN EMBL-EBI]
GO:0034284        [VIEW IN EMBL-EBI]
GO:0034285        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042593        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071322        [VIEW IN EMBL-EBI]
GO:0071324        [VIEW IN EMBL-EBI]
GO:0071326        [VIEW IN EMBL-EBI]
GO:0071329        [VIEW IN EMBL-EBI]
GO:0071331        [VIEW IN EMBL-EBI]
GO:0071332        [VIEW IN EMBL-EBI]
GO:0071333        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:2000896        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGGTGGTTCATGGAGTGTCTCTGACTCCAGGTGTTCTCGTCTCAGCCTTCCCTCTTCCTCTCTCTTCTTCTTCTTCCTCCAATGCGCGACGATCTGTCAATGGAAACTCAACCGTCTCTTTCTTCCTGAAGAAACGCCCTCTCTCTCGGAAGATCTTTGCTGGGAATCAATCTGCTAAGTTTGATTCTAAGTCACAAGCTATCTCTGCCTCCAAGAAAGTCTTAGTACCTGATAATGTTGATCATGGTGCTTCTTTGGTGACTCATGATCCCCTACAAGGTCCCAGCAGCGTTACAGAAGAAGAAGAAGAACCACAGATATTAAATCTAGAAAGTCAAACAATGGTAGAGGATGGCACAGTAATAGCTGAAGACCGAGCGTCTGTTTCTGTTAATTCGAGTAACCTCGTCAAGGAGAAAGAGGTCAAACCAAGAACAGTTCCCCCACCTGGTAATGGGCAGATTATATATGAGATTGACCCCATGTTGCGGAGTTACAAAGACCATCTTGATTACCGCTATAGACAGTATAAAAGATTGCGCGAGGAAATAGACAAGTATGAGGGAGGTCTGGAGGCATTCTCTCGTGGCTATGAAAAGTTAGGATTTCTACGCAGTGATGCCGGTATAACTTATAGAGAGTGGGCGCCTGGAGCTAAGTCTGCATCACTAATTGGAGATTTCAACAACTGGAATCCTAATGCAGATATCATGACTCGTAATGAATTTGGTGTTTGGGAGATCTTCTTGCCCAACAACACGGATGGTTCGCCTGCAATCCCTCATGGCTCACGTGTAAAGATTCGTATGGATACACCATCTGGCATCAAAGACTCAATTCCTGCTTGGATCAAGTTCTCGGTGCAAGCTCCAGGTGAAATACCGTTCAATGGCATATACTATGATCCTCCAGAAGAGGAGAAGTATGTATTCAAACATCCTCAACCAAAGAGACCTAAGTCGCTGAGGATTTATGAGTCACATGTTGGCATGAGTAGCACGGAACCGATGATCAATACTTATGCTAATTTTAGAGATGATGTGCTTCCACGTATCAAAAAGCTTGGCTACAATGCTGTTCAAATCATGGCTATACAAGAACATTCATATTATGCCAGCTTTGGGTACCATGTCACAAACTTTTTTGCCCCTAGCAGCCGTTGTGGGACCCCAGAGGAACTAAAATCACTGATTGATAGAGCTCATGAGTTAGGTCTGGTCGTTCTGATGGATATCGTTCACAGCCATGCTTCAAAAAATACATTGGATGGACTGAACATGTTTGATGGAACTGATGCTCACTACTTCCACTCTGGACCTCGGGGTTACCATTGGATGTGGGACTCCCGTCTTTTCAATTATGGGAGCTGGGAAGTACTACGATATCTTCTTTCAAATGCTCGGTGGTGGCTAGAAGAATACAAGTTTGATGGATTTAGATTTGATGGTGTTACCTCAATGATGTATACTCATCATGGACTCTCGGTTGGATTTACTGGAAATTACACTGAGTACTTTGGGTTGGAAACTGATGTGGATGCTGTGACTTATCTGATGCTGGTAAATGATATGATTCATGGGCTCTACCCTGAAGCGGTTACCGTTGGGGAAGATGTCAGTGGTATGCCAACATTCTGCATTCCTGTCCAAGATGGTGGCGTAGGATTTGACTACCGTTTACACATGGCGATAGCTGATAAATGGATAGAAATTCTAAAGAAGCGAGATGAGGACTGGAAAATGGGGGACATCATTTACACGCTTACCAACAGAAGGTGGTCAGAGAAGTGTATTGCTTATGCTGAGAGTCACGATCAAGCTCTTGTCGGTGATAAAACAATTGCCTTCTGGTTAATGGACAAGGATATGTATGATTTCATGGCAGTAGACAGGCCATCAACTCCTCTGGTCGATAGAGGAATAGCTTTGCATAAAATGATCAGGCTTATAACCATGGGATTAGGCGGTGAAGGCTACTTAAATTTTATGGGGAACGAGTTCGGACATCCAGAATGGATCGATTTTCCCAGAGGCGAGCAGCGTCTTTCTGATGGGAGTGTGATTCCTGGGAACAACAACAGTTATGACAAATGCAGGCGCAGATTTGATCTTGGGGATGCGGACTATCTTAGATACCACGGACTGCAAGAGTTTGATCGGGCAATGCAGCATCTTGAAGAGAAATACGGTTTTATGACATCGGAGCATCAATTCATATCAAGAAAAGACGAAGGAGATAGAGTAATCGTGTTCGAAAGAGGTGATCTGGTCTTCGTCTTCAACTTCCACTGGACCAGCAGCTACTTTGATTACCGCATTGGTTGCTCCAAGCCAGGCAAATACAAGATCGTATTGGACTCGGACGATCCTCTGTTCGGTGGATTCGGCAGGCTCGATCGCAAGTCAGAGTATTTCACATTTGAGGGGTCTTATGACGGACGACCCTCCTCTTTCATGGTCTACACACCATGCAGAACAGCAGTGGTTTACGCTTTAGCAGACCGTGATGATGGTCTCGAGACTTTGGATCCAAAATCGTAA
Protein:  
MVVVHGVSLTPGVLVSAFPLPLSSSSSSNARRSVNGNSTVSFFLKKRPLSRKIFAGNQSAKFDSKSQAISASKKVLVPDNVDHGASLVTHDPLQGPSSVTEEEEEPQILNLESQTMVEDGTVIAEDRASVSVNSSNLVKEKEVKPRTVPPPGNGQIIYEIDPMLRSYKDHLDYRYRQYKRLREEIDKYEGGLEAFSRGYEKLGFLRSDAGITYREWAPGAKSASLIGDFNNWNPNADIMTRNEFGVWEIFLPNNTDGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPFNGIYYDPPEEEKYVFKHPQPKRPKSLRIYESHVGMSSTEPMINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRCGTPEELKSLIDRAHELGLVVLMDIVHSHASKNTLDGLNMFDGTDAHYFHSGPRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLSVGFTGNYTEYFGLETDVDAVTYLMLVNDMIHGLYPEAVTVGEDVSGMPTFCIPVQDGGVGFDYRLHMAIADKWIEILKKRDEDWKMGDIIYTLTNRRWSEKCIAYAESHDQALVGDKTIAFWLMDKDMYDFMAVDRPSTPLVDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGEQRLSDGSVIPGNNNSYDKCRRRFDLGDADYLRYHGLQEFDRAMQHLEEKYGFMTSEHQFISRKDEGDRVIVFERGDLVFVFNFHWTSSYFDYRIGCSKPGKYKIVLDSDDPLFGGFGRLDRKSEYFTFEGSYDGRPSSFMVYTPCRTAVVYALADRDDGLETLDPKS